CDS

Accession Number TCMCG007C27952
gbkey CDS
Protein Id XP_033145494.1
Location complement(join(16724556..16725351,16725438..16725548,16725631..16725701,16725792..16725869,16726016..16726222,16726295..16726474,16726547..16726769,16726961..16727281,16727361..16727947))
Gene LOC103865117
GeneID 103865117
Organism Brassica rapa

Protein

Length 857aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033289603.1
Definition autophagy-related protein 9 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category U
Description Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle
KEGG_TC 9.A.15.1
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K17907        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04136        [VIEW IN KEGG]
ko04137        [VIEW IN KEGG]
ko04138        [VIEW IN KEGG]
ko04140        [VIEW IN KEGG]
map04136        [VIEW IN KEGG]
map04137        [VIEW IN KEGG]
map04138        [VIEW IN KEGG]
map04140        [VIEW IN KEGG]
GOs GO:0000045        [VIEW IN EMBL-EBI]
GO:0000407        [VIEW IN EMBL-EBI]
GO:0000422        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005776        [VIEW IN EMBL-EBI]
GO:0006914        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007005        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016236        [VIEW IN EMBL-EBI]
GO:0022411        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034497        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044804        [VIEW IN EMBL-EBI]
GO:0044805        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0061726        [VIEW IN EMBL-EBI]
GO:0061919        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:1903008        [VIEW IN EMBL-EBI]
GO:1905037        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGAGTGGGGGGCAAAAACCTCCAAATGTATTCAACTTCTTTAAATGGCAACGTGGTGAGCCCTCATCGTCTTTAACCACTGGATTACTCGATAATGCGTCGCACGAGATTGAGCTGTCCAACTACGGGGGAATAGGCATACCAAGCCCTGGTAGCGAGAGCCCGTCGGGGCTTCTCAACGGAGAGAGCTTAAACGTACAACCCATAGCTGATTTGGATCTCTTCTTCGAGAAGCTCTACAGCTACTACAGAGACAAAGGCCTTTGGTGTATTATTGTTAAGTGGGCTGTTGAGCTTCTGAGTCTCGGCTTCATCATATGCTTCTCTGGGTTCTTCTTGCTGTATGTGGATTGGCGTGGTCTTAAGAACGCGAAATGTGGAATGGATGCTGTTGAATCGGGGACTAAGCCGTGTGATCTTGTGAAAGAAGCTATCCATGAGCACCCTCTTTCCCCTTTCACGCTCACAACGGCTATAATCGTTGGATACTTGGCTCTCTTCTCTCTCTACTGGCTCTTCTGCTTCTTAAGGTTCTTTGCACAATTGAAGGATACGTTAGACTTCCGGCACTTTTATTACAACAGCCTTCATGTCACTGACAACGAGATCTTGACCATGCCATGGGAAACAGTCCTTGAAAAGGTGGTTCAGTTACAAAGCTCACAGCGTCTTTGTGTGGTGAAGGATCTTTCAGCTCATGATATTGTTATGCGCCTTATGCGGAAAGAGAACTACTTGATCGGAATACTCAACAAAGGTTTGCTTTCTTTCCCAATCTCCCATTGGATCCCTGGTGCTGGTCCATTAGTCAAAACTGCCCCAGATGGGACGCAACATCACCTTGTATTGACAAAGACGCTTGAGTGGACCCTGAACTGGTGCATATTGCAGAGCATGTTTGACTGCAATTTTCGTGTAAGAAGGGACTTTGTATCAAACCCTGAGACACTGAAGAAACGGCTGTTTGTAGTTGGGCTTGCTATGCTTCTGCTGTCACCATTTCTTGTCATCTTCATGTTGGTGTATCTTTTCCTAAGGCATGCTGAGCAGTTTTACAATCATCCAAGTACTGCATCTTCTAGAAGATGGTCCAATTTGTCTAGATGGCTCTTCAGGGAGTTCAATGAGGTTGACCATTTATTCAAGCATAGGATTAACAGCAGTGCAGAACACGCGTCCCAATATCTGAACCAGTTCCCCTCGCCTATTATCTCCATTATTGCAAAGTTCGTCTCGTTTGTGTCTGGCGGCTTTGCGGCTGTGTTAATCATCATTGCGTTTCTCGAAGAATCTCTTCTAGAGGGCCATATATTTGGTCGCAATTTGTTCTGGTATGCTGCTGTGTTTGGAACTATTACAGCCATTAGTCGGGCTGCTATCTCGGATGAACTTTTGGTCCTCGACCCTGTGGGAACTATGGCTGCGGTGGTGCAACACACTCACTATATGCCTAAGAGATGGCGTGGTAAGGAGAACAAAGATGATGTCCGTTTGGAGTTAGAGACCTTGTTTCAGTATACTGGAATGATGTTGCTGGAGGAGATAGCTTCTATTTTCATAACACCGTTTTTGCTGATGTTTATCGTGCCAAAGCGGGTTGATGATATACTGCAATTCATAAGAGATTTTACAGTTGATATTGAAGGTGTAGGCAACGTTTGCAGCTTTAGTGCTTTTGACTTCGAGAACCATGGGAATGCTAAGTATGGTTCACCTCGTAATGTATCTCGTGAGAACAGAAGCTCTCAGGGAAAAATGGAGAAATCATTCTTGAGTTTCCAGAGTAGTTACCCTTCTTGGGAATCAGATTCTCTTGGGAAGCAGTTTCTATCCAATCTCAGAGCCTTCCGGGACCGAAAGCTTCAAGAGATAAACACAAGACACACATTCTCTCCTAGCAGGGCGTGGCGTGAAGCTCCTATCTTTCGTCCTGGTCATATAGATAATAACAGCGTTTTATACAGAGACGCTCCGAGAAATCCACGCAATCACATTGACTCCATGTGGCTGATTGATTCAGATCAGAGGAACCACCCTTATCTTCTTGACTGGTACTACACTTCTCAGCCTCACAACAGAACCGATCATCACCCGGTAGAGAGAGTAGTGAACGAGCTCTTGACTCCAAATCTAGACGGTGTGGACTGTTGGCCTCCTAATCTGGGAGTCCGTGGTGGAGATATGGAAGCAAGCACGTCGGGTCAGTTCTTCAGAGATAGCATTCTGCGCCAGCGAGAACCTGAAGGAGAAGAAAACTATGGTCATCATCATCCTCTTGATGGTAGGAGTCAGTGGTGGGGAAGAGGCGGAGACGGTTCTTCTCACAACGGTGCATCTCATCCCGCAGCGGCTAATAGCTTCATCGAGCCACCTGATTTCATAAACCCGTACACAGCGAGAAACTTGTTAGACAACTCGTGGGAAGGAAGAAGCATTGAAGAAGAGGAGGAAGAAGAAGGTTTGGATTGGGGAGATGATGCAAGAAGGAATTTGTCAAGAACTACATTCATGGATGATGATGATGATGTTGAAGGTGGGATTGGTCTACATTTCGGTGATGTATATAGCTGA
Protein:  
MMSGGQKPPNVFNFFKWQRGEPSSSLTTGLLDNASHEIELSNYGGIGIPSPGSESPSGLLNGESLNVQPIADLDLFFEKLYSYYRDKGLWCIIVKWAVELLSLGFIICFSGFFLLYVDWRGLKNAKCGMDAVESGTKPCDLVKEAIHEHPLSPFTLTTAIIVGYLALFSLYWLFCFLRFFAQLKDTLDFRHFYYNSLHVTDNEILTMPWETVLEKVVQLQSSQRLCVVKDLSAHDIVMRLMRKENYLIGILNKGLLSFPISHWIPGAGPLVKTAPDGTQHHLVLTKTLEWTLNWCILQSMFDCNFRVRRDFVSNPETLKKRLFVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWLFREFNEVDHLFKHRINSSAEHASQYLNQFPSPIISIIAKFVSFVSGGFAAVLIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAISDELLVLDPVGTMAAVVQHTHYMPKRWRGKENKDDVRLELETLFQYTGMMLLEEIASIFITPFLLMFIVPKRVDDILQFIRDFTVDIEGVGNVCSFSAFDFENHGNAKYGSPRNVSRENRSSQGKMEKSFLSFQSSYPSWESDSLGKQFLSNLRAFRDRKLQEINTRHTFSPSRAWREAPIFRPGHIDNNSVLYRDAPRNPRNHIDSMWLIDSDQRNHPYLLDWYYTSQPHNRTDHHPVERVVNELLTPNLDGVDCWPPNLGVRGGDMEASTSGQFFRDSILRQREPEGEENYGHHHPLDGRSQWWGRGGDGSSHNGASHPAAANSFIEPPDFINPYTARNLLDNSWEGRSIEEEEEEEGLDWGDDARRNLSRTTFMDDDDDVEGGIGLHFGDVYS